Model Repositories

Several model repositories host the xml-based model descriptions for computer-readable and readily executable multicellular models, including

Spatio-temporal model of YAP activation during liver regeneration

Spatio-temporal model of Wnt-Hh interaction in the liver

and further models at LiSyM SEEK

Morpheus model of spatio-temporal liver zonation from Wnt-Hh crosstalk

Morpheus model of spatio-temporal YAP/Hippo pathway activation during liver regeneration

and further models at FAIRDOMHub

Spatio-temporal multicellular pancreas differentiation patterning

Spatio-temporal morphogen gradient formation and BMP signaling

Multicellular morphodynamics

and further models at BioModelsDB

>100 models at Morpheus model repository